PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON99900.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

DBB

Protein Properties

Length: 208aa MW: 23240.2 Da PI: 5.1014

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON99900.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.4	2.5e-07	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++lfC ++ lC +C ++ H PON99900.1 4 LCDVCEKAAAILFCAADEAALCTSCDQKVH 33 7****99****************998 PP
2	zf-B_box	29.5	1.5e-09	52	92	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38 + ++C+ +e+ ++ ++Ce++++ lC +C + H g H+ PON99900.1 52 DVPRCDICESGPAFFYCETDGSSLCLQCDMIVHVGgkrtHR 92 5799****99****************99966666776 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MRTLCDVCEK AAAILFCAAD EAALCTSCDQ KVHMCNKLAS RHVRVGLADP SDVPRCDICE 60 SGPAFFYCET DGSSLCLQCD MIVHVGGKRT HRRYLLLRQR IEFPGDKSVH FEELGLQPLD 120 PNEARREQSQ PPKLNQQNHS LSPVPVLENN IDGDAKMDNK LIDLNTQPHR MDGQPSTNQE 180 QDMDVFSGTD NQSTSVVPLV SFQREPEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G21320.1	3e-77	DBB family protein