PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON99983.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB

Protein Properties

Length: 453aa MW: 50988.6 Da PI: 6.1527

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON99983.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.1	5.6e-15	24	68	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd++l + + +G+++W+ Ia+++ +t qc+ rw++yl PON99983.1 24 TWTQEEDDILRQQISIHGTENWAVIASKFK-DKTTRQCRRRWYTYL 68 6**************************9.***********97 PP
2	Myb_DNA-binding	45	2.5e-14	74	117	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd+ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + PON99983.1 74 KGGWSPEEDLLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFST 117 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MQNTKKKTCS GNEDAKKKER HIVTWTQEED DILRQQISIH GTENWAVIAS KFKDKTTRQC 60 RRRWYTYLNS DFKKGGWSPE EDLLLCEAQK IFGNRWTEIA KVVSGRTDNA VKNRFSTLCK 120 KRAKYEAMAK ENSTSYINSN NKRVILRNGF GTNGTSETIV STKKLRRSHI SDVSENCNFE 180 DRLHKQCRTS TMDQQLRAPF AVLVQNSHNI NHLPAQHHVN ITKDVVTDAA QNNKYQGSFL 240 RKDDPKINAL MQQAELLSSL ALKVNTENTD QSLENAWKVL QDFLNQSKES DVLGYKLSDF 300 DFQLEDFKDL LDDLRSSNEG SRPSWRQPDL YDESPDSSEY STGSTLMSQT AGDKTEQLQA 360 EIGAADHDVV PGSQSIHVGE ESWVGECDKG MICSGNTEQA EIFPTCDEGT NDSQVVSALS 420 STEFGSPIHV TPMFRSLAAG IPSPKFSESV SCL

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MQNTKKKTCS GNEDAKKKER HIVTWTQEED DILRQQISIH GTENWAVIAS KFKDKTTRQC  60
RRRWYTYLNS DFKKGGWSPE EDLLLCEAQK IFGNRWTEIA KVVSGRTDNA VKNRFSTLCK  120
KRAKYEAMAK ENSTSYINSN NKRVILRNGF GTNGTSETIV STKKLRRSHI SDVSENCNFE  180
DRLHKQCRTS TMDQQLRAPF AVLVQNSHNI NHLPAQHHVN ITKDVVTDAA QNNKYQGSFL  240
RKDDPKINAL MQQAELLSSL ALKVNTENTD QSLENAWKVL QDFLNQSKES DVLGYKLSDF  300
DFQLEDFKDL LDDLRSSNEG SRPSWRQPDL YDESPDSSEY STGSTLMSQT AGDKTEQLQA  360
EIGAADHDVV PGSQSIHVGE ESWVGECDKG MICSGNTEQA EIFPTCDEGT NDSQVVSALS  420
STEFGSPIHV TPMFRSLAAG IPSPKFSESV SCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.1	1e-168	MYB family protein