PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO00287.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family TCP
Protein Properties Length: 180aa    MW: 19924.4 Da    PI: 6.7808
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO00287.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP82.51.1e-25451091166
         TCP  11 ihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........s 66 
                 +hTk +gR  R+Rl+a caar+F+L++eLG++++++tieWLl+qa p++ ++ g+         +
  POO00287.1  45 RHTKLNGRSCRIRLPAVCAARVFQLTRELGHKTNGQTIEWLLEQAGPSVVAALGSdvasggtvaN 109
                 8******************************************************5555433320 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MGSSVKIDHN SEPEVKDHSD NHKRSSKARQ KPVRENSSTK AIEYRHTKLN GRSCRIRLPA  60
VCAARVFQLT RELGHKTNGQ TIEWLLEQAG PSVVAALGSD VASGGTVANS PVSARQPPSL  120
EDPWECESKV LAKKECCGFA RVQPELEIDH LLMNFDMEFW ANEIAILQTG MAEGEDRDSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47620.12e-25TCP family protein