PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO00589.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB

Protein Properties

Length: 276aa MW: 30251.3 Da PI: 4.9814

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO00589.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.1	5.5e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+++ + G+g +W + +r+ g++R++k+c++rw++yl POO00589.1 14 RGPWSPEEDATLKNYMDKNGTGgNWISLPRKAGLNRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	41.6	3e-13	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd + + + G++ W+ Ia+ ++ gRt++++k++w++ POO00589.1 69 GCFTEEEDNVIWALYNNIGSR-WSVIASQLP-GRTDNDVKNHWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MGRAPCCDKT KVKRGPWSPE EDATLKNYMD KNGTGGNWIS LPRKAGLNRC GKSCRLRWLN 60 YLRPDIKHGC FTEEEDNVIW ALYNNIGSRW SVIASQLPGR TDNDVKNHWN TKLKKKLLAT 120 GSTSGNNNET TNNTLDHHLN LAPFSGLIPK TESSDQGNSA CCDTNSDNST YLMEGNYVDN 180 FDLKEPKFEP ISQLSYSNPV EVSDFGTNGN TSSSISSARE VSSLSTSSSN LAFDENTTGL 240 ASWSGIGGVN YIEDGINLVD MGFDPSNDVF LSGFGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36890.1	2e-69	MYB family protein