PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO00666.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bZIP

Protein Properties

Length: 214aa MW: 24467.5 Da PI: 11.046

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO00666.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.1	2.9e-11	100	145	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++ rr+++NRe+ArrsR RK++ +e+L++ v L eN++L ++l POO00666.1 100 RKRRRMISNRESARRSRMRKQKHLENLRNQVNRLRVENRELTNRLR 145 5789*************************************98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MISTFPSIFP SSDSILGNPF PSFDGGFTPW DCRELFPATP PLKPADDTSN SISSGDILVQ 60 SPKPIMSGSG SGSEDPNSNR SDSKPEQTGP NRAVSVVDER KRRRMISNRE SARRSRMRKQ 120 KHLENLRNQV NRLRVENREL TNRLRFVLYH YQRVRTENGR LRSEHVALRQ KLYDIRQILL 180 FRQFQQFSSP ATTTTTTTWP CNTVISEQTP SLIT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	100	104	RKRRR
2	100	121	RKRRRMISNRESARRSRMRKQK
3	113	120	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49760.1	4e-34	bZIP family protein