PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO00708.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GRAS
Protein Properties Length: 508aa    MW: 56781.2 Da    PI: 5.2427
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO00708.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS351.21.6e-1071265073374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 e Lle A+av++++ +++q+l++ l+el+sp+gd+ q+laayf++AL +r+++s++++ ++l + ++++ + +++ +++  f+evsP+ +f+h+++N a
  POO00708.1 126 EILLETARAVADKNSSRVQQLMWMLNELSSPYGDSDQKLAAYFLQALFSRVNDSGDRCHRTLVSASEKTCSFESTRKMVLKFQEVSPWTTFGHVACNGA 224
                 579**********************************************************97777775554444455556****************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg........skeeleetgerLakfAeelgvpfefnvlvak.rledlel 191
                 I+ea+ege ++HiiD++ ++++QWp+Ll+aLa+R++++p+lR+T+v s +           ++ ++e+g r++kfA+ +gvpf+f+v+++  +l++l+l
  POO00708.1 225 IMEALEGEPKLHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTVISTRDAassgpggsVQKVMKEIGTRMEKFARLMGVPFKFHVVHHYgDLSELNL 323
                 *********************************************9997666889999999999***********************97667******* PP

        GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsleaklpreseerikvE 286
                  eL+v+ +EalaVn+v +lh++     ++ s+rd v  +++sl+P+vv+vve+ead++ +    +F+ +f e+++++ + f++l++++pr+s+er ++E
  POO00708.1 324 AELDVRDDEALAVNCVNSLHSVA----AVGSRRDYVAAAFRSLRPRVVTVVEEEADLDVGpdgvEFVSGFQECVRWFRVYFEALDESFPRTSNERLMLE 418
                 **********************8....8888999********************99865545669********************************** PP

        GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve..eesgslv.lgWkdrpLvsvSaWr 374
                 r+  gr++v++vac+ ++++er+et+++W++rl+ aGF+pv++s+++ +++++llr++k dg+ +   ++ g+ + l+Wkd+p+v++SaWr
  POO00708.1 419 RA-AGRAVVDLVACSPSDSVERRETAARWSRRLHGAGFSPVAFSDEVSDDVRALLRRYK-DGWAMTqcSDAGAGIfLTWKDEPVVWASAWR 507
                 **.********************************************************.6655443355555545**************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 508 aa     Download sequence    
MDTLFRLVSL QSDQQSFNST SRTSSSSRSS RQYQQNHQDQ EEECFNFFMD EEDFSSSSSK  60
HYYPYNHPHP STTSTPTPTP TPTPPHNPNT TTTNASTSTT DFPFSPAGDL INNLDLFSSG  120
NKWAPEILLE TARAVADKNS SRVQQLMWML NELSSPYGDS DQKLAAYFLQ ALFSRVNDSG  180
DRCHRTLVSA SEKTCSFEST RKMVLKFQEV SPWTTFGHVA CNGAIMEALE GEPKLHIIDI  240
SNTYCTQWPT LLEALATRTD ETPHLRLTTV ISTRDAASSG PGGSVQKVMK EIGTRMEKFA  300
RLMGVPFKFH VVHHYGDLSE LNLAELDVRD DEALAVNCVN SLHSVAAVGS RRDYVAAAFR  360
SLRPRVVTVV EEEADLDVGP DGVEFVSGFQ ECVRWFRVYF EALDESFPRT SNERLMLERA  420
AGRAVVDLVA CSPSDSVERR ETAARWSRRL HGAGFSPVAF SDEVSDDVRA LLRRYKDGWA  480
MTQCSDAGAG IFLTWKDEPV VWASAWRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.10.0GRAS family protein