PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO00851.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 278aa    MW: 30290 Da    PI: 4.7294
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO00851.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.6e-1861111155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr ++ +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  POO00851.1  61 PVYRGVRMRS-WGKWVSEIREPRK---KNRIWLGTFSTPEMAARAHDVAALSIKG 111
                 68*****998.**********854...59**********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MLPTESPSAM ADPLNSEPAE SSVNSSTSQS SPSVQGKSPD PDQKRVKRPR ENSDNSNSKH  60
PVYRGVRMRS WGKWVSEIRE PRKKNRIWLG TFSTPEMAAR AHDVAALSIK GNSAILNFPE  120
LAGSLPRPES NSPRDVQAAA AKAASMEIIV NKPSSSTSSS SSSMSQSSSS LAATSSSSYD  180
VSSSNSSSSS STPEELSEIV ELPSLGTSYE SPESGNEFVF VDSVDQYGWL YPHPWYHHSF  240
DEDYGCFREE DYHIDNIAAM SEPECAIPSA FEALLWQH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.15e-57ERF family protein