PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO00908.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

CPP

Protein Properties

Length: 608aa MW: 64510.6 Da PI: 7.3062

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO00908.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	43.9	4.7e-14	124	163	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnC++s+Clk+YCeCfa+g +C+ C+C +C N+ e+ POO00908.1 124 KQKQCNCRHSRCLKLYCECFASGIYCDG-CNCVNCYNNVEN 163 89************************.******9875 PP
2	TCR	50.9	3.2e-16	208	247	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e POO00908.1 208 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 247 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 608 aa Download sequence
MGEGEEGDLP PKKIQSDAAA AAGGSGAALS DAPTKKLARQ LDFTGFGGAS GSAVLPEHPQ 60 SQPVLPAAQP MTVSQPVVQS QPQPQVVAVP VTPQPSVPPA RMVKPESPKA RSRTNEAKDG 120 TPKKQKQCNC RHSRCLKLYC ECFASGIYCD GCNCVNCYNN VENEAARREA VEATLERNPN 180 AFRPKIASSP HGPRDTREDA GEVMILGKHN KGCHCKKSGC LKKYCECFQA NILCSENCKC 240 MDCKNFEGSE ERQALFHGDH GSNMAYIQQA ANAAITGAIG SSGYASPPVS KKRKGQELFF 300 GPTVTPKDTT VHRIGQYQQA NHIRAPAPPS LPSVPAARLG SAAGVGPSKF TYRSLLADII 360 QPQDLKELCS VLVVLSGEAA KTIADQRSPT EKRAEDQSET SLASTTQDRL QSQKESELEK 420 AVADDCSSAN QADKTGADDS SSDGADLPKG RPMSPDTLAL MCDEQDTMFM AAASPGGTGH 480 GCNISSQLPY GQGMTEVYAE QERIVLSKFR DCLKMLIALG EIKETKCSSL ARSEPSLTNG 540 FTNAKIETNF QHGPASNGVS KTILPPTANP KTTQTVSAAV AAASSELPKI PPFPENGGVA 600 NQKTEKEM

Sequence ? help Back to Top

Protein Sequence Length: 608 aa Download sequence

MGEGEEGDLP PKKIQSDAAA AAGGSGAALS DAPTKKLARQ LDFTGFGGAS GSAVLPEHPQ  60
SQPVLPAAQP MTVSQPVVQS QPQPQVVAVP VTPQPSVPPA RMVKPESPKA RSRTNEAKDG  120
TPKKQKQCNC RHSRCLKLYC ECFASGIYCD GCNCVNCYNN VENEAARREA VEATLERNPN  180
AFRPKIASSP HGPRDTREDA GEVMILGKHN KGCHCKKSGC LKKYCECFQA NILCSENCKC  240
MDCKNFEGSE ERQALFHGDH GSNMAYIQQA ANAAITGAIG SSGYASPPVS KKRKGQELFF  300
GPTVTPKDTT VHRIGQYQQA NHIRAPAPPS LPSVPAARLG SAAGVGPSKF TYRSLLADII  360
QPQDLKELCS VLVVLSGEAA KTIADQRSPT EKRAEDQSET SLASTTQDRL QSQKESELEK  420
AVADDCSSAN QADKTGADDS SSDGADLPKG RPMSPDTLAL MCDEQDTMFM AAASPGGTGH  480
GCNISSQLPY GQGMTEVYAE QERIVLSKFR DCLKMLIALG EIKETKCSSL ARSEPSLTNG  540
FTNAKIETNF QHGPASNGVS KTILPPTANP KTTQTVSAAV AAASSELPKI PPFPENGGVA  600
NQKTEKEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-172	CPP family protein