PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO00923.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GeBP
Protein Properties Length: 234aa    MW: 26291.4 Da    PI: 5.0757
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO00923.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57379.94e-2540134297
      DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWg 97 
                  +qrl+ eeDei++LqGli+f +k+g +  + +++f++ +  s+  +vs++ql   +  +K+Kf++++ + ++++++p+f+++hdqk++elsk+iWg
  POO00923.1  40 SSQRLFGEEDEILILQGLIEFYEKNGNN--SSVSEFCDVMAASLGENVSQKQLNGIVCCMKRKFEDNELQkSDDDESPAFASPHDQKVYELSKMIWG 134
                 58************************66..5689******************************9876553889999*******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MEDAYNSMVP DSADEDEPKQ KKSKFSAEEK MKRVADASPS SQRLFGEEDE ILILQGLIEF  60
YEKNGNNSSV SEFCDVMAAS LGENVSQKQL NGIVCCMKRK FEDNELQKSD DDESPAFASP  120
HDQKVYELSK MIWGNRIRTT TTTTTTTTTT TTGGGGGAAA AANNEDRLGM LFYDFYSRHG  180
LNLDLFEESK GLYLAKRWAK FKVSECKYLI QRSKFEAKMQ NVKLQAYKKE SVGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.18e-17GeBP family protein