PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO00924.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GeBP
Protein Properties Length: 248aa    MW: 28848.5 Da    PI: 9.4187
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO00924.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57379.64.8e-2551142597
      DUF573   5 rlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                  l+s++D+i+lLqGli f +k+g +   +  +fy+ +kks++ k+sk+ql   + r+ +Kf +++ ++ +g +p+f+++hdqk++elsk+iWg
  POO00924.1  51 ILFSQDDQILLLQGLIAFLEKHG-KKNRNFGEFYDVIKKSLHPKMSKKQLRRQVSRMERKFVDNEPTKGDGGSPTFANPHDQKVYELSKIIWG 142
                 46*********************.55889**************************************99***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MDDTDHYNSS IVPDSADDYE RPSEKKAKFT AEEKMKQVDD AHHLKQASQV ILFSQDDQIL  60
LLQGLIAFLE KHGKKNRNFG EFYDVIKKSL HPKMSKKQLR RQVSRMERKF VDNEPTKGDG  120
GSPTFANPHD QKVYELSKII WGNSTTTTTT TTTTTTTTTN TNTTVVHEDH RLQVSDDIDG  180
PLSIVLKDFV THNGLDLNWV EEPKRKHLAR RWKKYKIAEC NYFHVRAKFQ DMMHHVKMQV  240
YSRELARQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.11e-11GeBP family protein