PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO00972.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family NF-YA
Protein Properties Length: 206aa    MW: 22750.2 Da    PI: 8.2166
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO00972.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.35.3e-33111167158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +ep++VNaKQy++Il+RRq+Rak+e+e+k+  ksrkpylheSRh hAlrR+Rg+gGrF
  POO00972.1 111 EEPVFVNAKQYHGILRRRQSRAKAESENKV-VKSRKPYLHESRHLHALRRARGCGGRF 167
                 69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MTSSVHDLSD NCESDEPQKN SESQIQSSPA PGMSHTVVTT PNVQYQSPQF GAGQAVAPAA  60
YPYPDPYYRS IFAPYDAQPY PPQPYGGQPM VHLQLMGIQQ AGVPLPSDAV EEPVFVNAKQ  120
YHGILRRRQS RAKAESENKV VKSRKPYLHE SRHLHALRRA RGCGGRFLNA KKNEKEQDEV  180
APGDKSQPNI NLNSDRNERA PADGTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.23e-60NF-YA family protein