PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO01205.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TALE

Protein Properties

Length: 786aa MW: 86465.8 Da PI: 7.869

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO01205.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.1	1.7e-09	617	654	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gLt +qV++WF N R + POO01205.1 617 FEHflHPYPTDTDKHMLATQTGLTRNQVSNWFINARVR 654 664459******************************87 PP
2	BELL	110.6	9e-36	468	536	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+q+kk+kLl + eeV +rYkqy++q+q+v+ssFe vagl s++pY+slAl a+SrhFrcLk+ai++q+ POO01205.1 468 EHQQKKTKLLYMHEEVSRRYKQYRQQMQMVVSSFESVAGLSSSTPYISLALEAVSRHFRCLKNAISDQL 536 89****************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 786 aa Download sequence
MESTSGLSGV YRPESHVPQQ SRRDKLRVQQ ASSTLVVPIS HHLDYNPPIE PFTALHPENT 60 YNNIQHHNHV RNNRHNPNNF LFDPSFLSSE MLDFSRNNNN TQNNISVLHH HHQPHRINNT 120 NTLTCHDDHQ DHLSTTPAAA QTSERSSSSS MAIGDASFSF PHSKPNSEPA QGSSFINWRS 180 LHSNNSSNIP PQQSSFENWS SPTQNISGQK YLEAMVMSGN ELALLPSFVN QSTTLRFDNS 240 GSSSSQMETH QDEPYQKREQ DHHAELLRTS NLQGLSLSLS SNPQSATTLP NMPHPHHLGD 300 HHQESKPGEK SGYVGSVSMP KPSIISKACG SKSLQDIVGN INNASNPYRS SGPLGPFTGY 360 ATILKSSRFL RPAQQLLDDF CGSKGGINVK IACGEVSERI SGGGGVSGCV SASAVSGSCS 420 GDAVNAIETE VLGKGNNSCA SSSTFYGSNE ICGDGGVGSI SFECSKPEHQ QKKTKLLYMH 480 EEVSRRYKQY RQQMQMVVSS FESVAGLSSS TPYISLALEA VSRHFRCLKN AISDQLKHTR 540 RALGEDLSSP TTGSSISKGT TDALMSSTAR LKYMEQSFQK HKSSGPNLGF PEPQQPVWRP 600 QRGLPERSVA ILRAWLFEHF LHPYPTDTDK HMLATQTGLT RNQVSNWFIN ARVRVWKPMV 660 EEIHMLETKG LADQVVVDRN VNPGKNDHRV INNPENDQGT CGLSNTDQTS TKLGTIVMPN 720 KQLEGSGIGY SSSPGNRERD GSLLADQSQS HQEKRSRLEC QVPNSMAGAL LGFVPYHRTG 780 LEVWRQ

Sequence ? help Back to Top

Protein Sequence Length: 786 aa Download sequence

MESTSGLSGV YRPESHVPQQ SRRDKLRVQQ ASSTLVVPIS HHLDYNPPIE PFTALHPENT  60
YNNIQHHNHV RNNRHNPNNF LFDPSFLSSE MLDFSRNNNN TQNNISVLHH HHQPHRINNT  120
NTLTCHDDHQ DHLSTTPAAA QTSERSSSSS MAIGDASFSF PHSKPNSEPA QGSSFINWRS  180
LHSNNSSNIP PQQSSFENWS SPTQNISGQK YLEAMVMSGN ELALLPSFVN QSTTLRFDNS  240
GSSSSQMETH QDEPYQKREQ DHHAELLRTS NLQGLSLSLS SNPQSATTLP NMPHPHHLGD  300
HHQESKPGEK SGYVGSVSMP KPSIISKACG SKSLQDIVGN INNASNPYRS SGPLGPFTGY  360
ATILKSSRFL RPAQQLLDDF CGSKGGINVK IACGEVSERI SGGGGVSGCV SASAVSGSCS  420
GDAVNAIETE VLGKGNNSCA SSSTFYGSNE ICGDGGVGSI SFECSKPEHQ QKKTKLLYMH  480
EEVSRRYKQY RQQMQMVVSS FESVAGLSSS TPYISLALEA VSRHFRCLKN AISDQLKHTR  540
RALGEDLSSP TTGSSISKGT TDALMSSTAR LKYMEQSFQK HKSSGPNLGF PEPQQPVWRP  600
QRGLPERSVA ILRAWLFEHF LHPYPTDTDK HMLATQTGLT RNQVSNWFIN ARVRVWKPMV  660
EEIHMLETKG LADQVVVDRN VNPGKNDHRV INNPENDQGT CGLSNTDQTS TKLGTIVMPN  720
KQLEGSGIGY SSSPGNRERD GSLLADQSQS HQEKRSRLEC QVPNSMAGAL LGFVPYHRTG  780
LEVWRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	8e-76	TALE family protein