PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO01705.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TCP

Protein Properties

Length: 200aa MW: 21040.7 Da PI: 9.0966

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO01705.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	115.7	5.9e-36	47	130	7	93
TCP 7 rhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaks 93 + ++hTkv+gR+RRvR++a caar+F+L++eLG+ +d++tieWLl+qa+p+i++ltg++s +a + s s +as+sss+++a+s POO01705.1 47 ASRDRHTKVNGRGRRVRMPAMCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIALTGSGSAPAGPV---STSATASFSSSSSSAPS 130 578********************************************************88888444...33333333333322222 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
MGSEIALHNP SPSTDHRPNP DSTAVVAAAP AAKTQIAVSR KASSAAASRD RHTKVNGRGR 60 RVRMPAMCAA RIFQLTRELG HRSDGETIEW LLRQAEPSII ALTGSGSAPA GPVSTSATAS 120 FSSSSSSAPS ASIPCRVQPI AVTGGSGLFA VAPPPSCRLD LCQPVPVPLE FRHMPFTTLL 180 LQSSTTEAEQ RQQEEALREH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37000.1	1e-34	TCP family protein