PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO01931.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 231aa MW: 26834.2 Da PI: 4.6732

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO01931.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	43.9	7.4e-14	24	182	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgk...rknratksgyWkat 86 lp G+rF+Ptd e + yL k+ + + +l++++ ++d +d+ + + k e++++ F +++ k+++++ r+ +g+W+ POO01931.1 24 LPLGYRFSPTDLESM-WYLSLKTMNLPipgpKNLFRHLVDAD--GNASNDMFNeidalmEGKIPENQLFLFLPQHDKSQSKNglgYYCRKGGNGFWRVH 119 699*********9.9*****9444433334444444..444444432233333334467799999999888886553446778889*99 PP NAM 87 gkdkevlsk..kgel.....................vglkktLvfykgrapkgektdWvmheyrl 128 ++ ++++ + +g k+ +v+y+g+++ g +t+W+m+e++l POO01931.1 120 SSKPLIHRTsvR--PlkdcggtfmelfaegkgawhkIGKKTRFVYYEGKEKPGIQTEWLMDEFEL 182 887767665440..2555666677777777788888*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MKDEYELCEG TLEDKGREIS QISLPLGYRF SPTDLESMWY LSLKTMNLPI PGPKNLFRHL 60 VDADGNASND MFNEIDALME GKIPENQLFL FLPQHDKSQS KNGLGYYCRK GGNGFWRVHS 120 SKPLIHRTSV RPLKDCGGTF MELFAEGKGA WHKIGKKTRF VYYEGKEKPG IQTEWLMDEF 180 ELNHNYLPKK VTKCVLSKVF RKEISIEPSE DEDEDEDEDD EMTDYSDDYY E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	2e-10	NAC family protein