PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO02027.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 144aa MW: 15958.3 Da PI: 9.5157

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO02027.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.5	0.00058	33	72	10	54
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + R +++ ++ L++l+ + +K + a++L +A+ YI+ L POO02027.1 33 KERKENLGAKIVALQQLVSPY-----GKTDTASVLHEAMGYIQFL 72 566777778899999999998.....9****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 144 aa Download sequence
MTEHKRSPCS VDQSNFPSLA SKRQKPDLSI STKERKENLG AKIVALQQLV SPYGKTDTAS 60 VLHEAMGYIQ FLHEQVKVLS APYLQSTPPT QMQELEPYNL RSRGLCLVPV SCTLGVARSN 120 GADIWAPIKT TSPKFEKSSI SQFH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G05710.3	1e-60	bHLH family protein