PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02374.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 229aa    MW: 25780.8 Da    PI: 10.2633
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02374.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.3e-1079123755
                 HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 e Er RR ++N++++ L +l+P  +     +K +   +L  ++eYIk+L+
  POO02374.1  79 EKERGRRLKMNESLSILESLVPGlL-----PKTTREKVLHSTIEYIKYLE 123
                 78*********************55.....89999999**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MENEGKPKVK EELNKEEEEI NKLVLGIMEG YSDSVIPPLS HFKPLLESTI VAQQGSSSRK  60
RARTKSSSWA RESRAESLEK ERGRRLKMNE SLSILESLVP GLLPKTTREK VLHSTIEYIK  120
YLEEKKKMLE KLKESSAPKG RLALPCTRSS RNLSVSVKFS GNLAFFGIQT PKRQGLVTQI  180
FMVFHKHMAE VFAANVVVNH SQLTLTVTAF VDGNGSNTVE EIKRDILIL