PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO02383.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bZIP

Protein Properties

Length: 408aa MW: 43362.9 Da PI: 7.2933

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO02383.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	68	1.5e-21	323	385	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++ L++++++L++eN L++e+++++ e+++l se+ POO02383.1 323 ERELKRQRRKQSNRESARRSRLRKQAECDDLAQRADALKEENANLRSEVNRIRSEYEQLLSEN 385 89**********************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MGSSEMDKPA KDKEKDSKTP PPSTQEQSST TSTGAVNPDW SGFQAYSPIP PHGFLASSPQ 60 AHPYMWGVQH IMQPYGTPPH PYVAMYPHGG LYAHPSMPPG SYPFSPFAIP SPNGIAAEAS 120 GNTPGSIEAD GRPEVKEKLP IKRSKGSLGS LNMITGKNND LGKTSGGSTN GVYSKSTESA 180 SEGTSEGSDE NSQDVSVIPI PSYGDYFVDL DSQLKSGGGQ DSLEGDASQN GNSMHGPQNG 240 GPNTPHSMVN QAMAIMPITA GGNPGAVPGP ATNLNIGMDY WGASAASTIP ALRGKVPSTP 300 VAGGIVTAGS RDSVQSQLWI QDERELKRQR RKQSNRESAR RSRLRKQAEC DDLAQRADAL 360 KEENANLRSE VNRIRSEYEQ LLSENASLKR NPKAVSTVQF QSTGKIRN

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MGSSEMDKPA KDKEKDSKTP PPSTQEQSST TSTGAVNPDW SGFQAYSPIP PHGFLASSPQ  60
AHPYMWGVQH IMQPYGTPPH PYVAMYPHGG LYAHPSMPPG SYPFSPFAIP SPNGIAAEAS  120
GNTPGSIEAD GRPEVKEKLP IKRSKGSLGS LNMITGKNND LGKTSGGSTN GVYSKSTESA  180
SEGTSEGSDE NSQDVSVIPI PSYGDYFVDL DSQLKSGGGQ DSLEGDASQN GNSMHGPQNG  240
GPNTPHSMVN QAMAIMPITA GGNPGAVPGP ATNLNIGMDY WGASAASTIP ALRGKVPSTP  300
VAGGIVTAGS RDSVQSQLWI QDERELKRQR RKQSNRESAR RSRLRKQAEC DDLAQRADAL  360
KEENANLRSE VNRIRSEYEQ LLSENASLKR NPKAVSTVQF QSTGKIRN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	340	346	RRSRLRK
2	340	347	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-142	bZIP family protein