PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02505.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 130aa    MW: 14805.5 Da    PI: 8.1958
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02505.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.86.1e-11431121887
                 --HHH.HTT---..--SEEEEEETTS..-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
          B3  18 lpkkfaeehggkkeesktltledesg..rsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                 +p +fa ++ ++  ++ +++   ++g   s e+k++  r k ++  l +GW+ Fvk ++L++gD+++Fkl + 
  POO02505.1  43 VPLNFAMTYIKN--QG-DVVPSGPNGryCSAEFKMKPpRIKNRGPKLYNGWQAFVKGKNLDVGDVCIFKLLDG 112
                 577888777433..33.68878888844455555544777777799***********************7653 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
LVSFLVYDLL FTPNSNYISL IELEHVIFFL HLIISLVVLE QLVPLNFAMT YIKNQGDVVP  60
SGPNGRYCSA EFKMKPPRIK NRGPKLYNGW QAFVKGKNLD VGDVCIFKLL DGTAILFEVS  120
IVRFTEFAYL