PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO02582.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bZIP

Protein Properties

Length: 404aa MW: 42631.9 Da PI: 6.5242

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO02582.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.9	2.8e-10	270	295	1	26
XXXXCHHHCHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKka 26 e+elkr++rkq+NRe+ArrsR+RK+ POO02582.1 270 ERELKRQKRKQSNRESARRSRLRKQV 295 89**********************95 PP
2	bZIP_1	35.4	2.3e-11	336	374	25	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 25 kaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +ae+e L+ +v++L +eN++L++el++l++e++kl+se+ POO02582.1 336 QAECEDLQARVETLNNENRTLRDELQKLSEECEKLTSEN 374 89***********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MGTGEENAAS KPSKPASSTQ EIPTAPSYPD WSSSMQAYYT AGATPPPFFA STVASPTPHP 60 YLWGSQHPLM PPYGTPVPYP AIYPPGGVYA HPNMTTTPVS MQTNPDLEGK GSDGKDRASA 120 KKSKVNSGNT GLVGSKAGES GKVTSGSGND GASQSAESGS EGSSDASDEN TNQQELSASK 180 KGSFDQMLAD GASAQNNSAG SILQASVPGK PVGSMPATNL NIGMDLWNAS SGGTGATKLR 240 PNPSAASSSV APGSMIGREG VMPDQWIQDE RELKRQKRKQ SNRESARRSR LRKQVLNELL 300 GYSTLRVGYP ISYTATVKFG LRLGICQSAP HHTTPQAECE DLQARVETLN NENRTLRDEL 360 QKLSEECEKL TSENGSIKEE LTRLCGPDVV ANLEHQARSG EGNS

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MGTGEENAAS KPSKPASSTQ EIPTAPSYPD WSSSMQAYYT AGATPPPFFA STVASPTPHP  60
YLWGSQHPLM PPYGTPVPYP AIYPPGGVYA HPNMTTTPVS MQTNPDLEGK GSDGKDRASA  120
KKSKVNSGNT GLVGSKAGES GKVTSGSGND GASQSAESGS EGSSDASDEN TNQQELSASK  180
KGSFDQMLAD GASAQNNSAG SILQASVPGK PVGSMPATNL NIGMDLWNAS SGGTGATKLR  240
PNPSAASSSV APGSMIGREG VMPDQWIQDE RELKRQKRKQ SNRESARRSR LRKQVLNELL  300
GYSTLRVGYP ISYTATVKFG LRLGICQSAP HHTTPQAECE DLQARVETLN NENRTLRDEL  360
QKLSEECEKL TSENGSIKEE LTRLCGPDVV ANLEHQARSG EGNS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	287	293	RRSRLRK
2	287	294	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36730.1	1e-95	bZIP family protein