PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02659.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 278aa    MW: 32298 Da    PI: 9.614
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02659.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.81.5e-1625111698
                 ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 +++++l+ +rl +pkkf+ ++g  ++ s ++ ++ + g +We++l  rk +g ++l+kGW eF+    +  gD +vF+++g+s+f  +  +f+
  POO02659.1  25 VQENTLRDKRLLIPKKFVHKYG--ETLSSKVFVKLPCGSEWEMEL--RKLDGCVWLGKGWPEFAGHYSIGYGDLLVFRYEGNSRF--HALIFD 111
                 47889999**********9998..55888****************..999999****************************9999..877776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MNLRSRRDTS QPSFSAVTPH FFRIVQENTL RDKRLLIPKK FVHKYGETLS SKVFVKLPCG  60
SEWEMELRKL DGCVWLGKGW PEFAGHYSIG YGDLLVFRYE GNSRFHALIF DPSTVEIDYP  120
LITSHFDAPK RGEITDDDSI EILEDYSLCT RKRKNSPLPH SRPQENSKTG PIVKTEIHFS  180
QRGPNERTPA QPNEKIPGNS MRKLHFLAED GDKDRLTTPI RRKCEAGRRM EQMTANDEVK  240
ALCRDSCFKS KRLTCKIVMQ PSQVIKYYDM TFPRYFAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.15e-30B3 family protein