PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02662.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 127aa    MW: 14181.4 Da    PI: 10.5198
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02662.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.12.9e-17401221198
                 HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  ks+ l+lp++f+++h  +k++++tl++    +rsW vkl   ++s++y+l++G ++F+++  L  gD+++ +l++r++  l+v++fr
  POO02662.1  40 KKSSVLRLPNDFVKSHIDQKAQTVTLKV---GNRSWLVKL--LRSSSGYYLSGGFSKFARQTSLSPGDVCIYELTERNQVVLKVSIFR 122
                 566789**********888778655554...56*******..*********************************9999999999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
KFSLGHLTQC PSSSLRDTIA FEAAEKFSSE QPFFKVIVGK KSSVLRLPND FVKSHIDQKA  60
QTVTLKVGNR SWLVKLLRSS SGYYLSGGFS KFARQTSLSP GDVCIYELTE RNQVVLKVSI  120
FRFTVVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-08B3 family protein