PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02664.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 193aa    MW: 22050 Da    PI: 9.825
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02664.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B364.61.5e-2096190299
                 EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 f v ++sd++k++ + +p +f +++  + ++++t++l+    r+W vk+    +++r+++++GW+ F+++n L+ +D+++F+l++ +e el+v++fr+
  POO02664.1  96 FRVAVRSDHMKHCTMHVPTTFSKRYFDEMAQQQTVILR-FGERTWPVKV--LSCPSRHMFSAGWSAFARDNFLQPRDVCIFELTKGNELELKVSIFRQ 190
                 567789*******************7777777777765.589*******..9********************************99**********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MSTPERCQKA LTHYGRTSSL ERASRFQPEN PFFTVAMKAS YTTGRSHFVS FLEEDKSRKL  60
ISEETTGCQV TERPSSSGVS RASAAASHFS STNPYFRVAV RSDHMKHCTM HVPTTFSKRY  120
FDEMAQQQTV ILRFGERTWP VKVLSCPSRH MFSAGWSAFA RDNFLQPRDV CIFELTKGNE  180
LELKVSIFRQ TVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.13e-20B3 family protein