PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02665.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 149aa    MW: 16633.9 Da    PI: 9.5023
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02665.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.51.1e-1751145299
                 EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 f+v ++s +++++ l +p +fa+++ ++ke+++t+tl     rsW v+l    ++ +  +++GW  F+++n L+ +D+++F+l++r+e  l+v++f++
  POO02665.1  51 FQVAMRSGHMAKCVLHVPLSFAKSYLEEKEQPQTMTLWV-GERSWLVTL--LTYPTGSRFSAGWAAFARENSLQPRDICIFELTKRNELGLKVSIFKQ 145
                 567789999****************87889999999765.88*******..777777779************************999999*****987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
AADDAYNHLD KSKKLISEES KGGQVIERPS SSGISRASEA ASRFFSSNPY FQVAMRSGHM  60
AKCVLHVPLS FAKSYLEEKE QPQTMTLWVG ERSWLVTLLT YPTGSRFSAG WAAFARENSL  120
QPRDICIFEL TKRNELGLKV SIFKQSGLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.13e-16B3 family protein