PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02670.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 120aa    MW: 13780 Da    PI: 6.2434
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02670.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.86.8e-1216714597
                EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3 45 sWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                 W v++++   r k ++ ++ kGW eF+++n+L++gD+++Fkl + +++++ v+++
  POO02670.1 16 LWFVEVKIrspRFKTCAATILKGWHEFANDNNLEVGDVCIFKLLDGDKTSFEVSIV 71
                5666664444545555567778********************77555655688776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
MKNQDDIVLC VPSVGLWFVE VKIRSPRFKT CAATILKGWH EFANDNNLEV GDVCIFKLLD  60
GDKTSFEVSI VRFAVYEYLH WSQRPLTSIE DVPFESENPF LKVLMQPTYV GPKAKHIVSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-07B3 family protein