PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02672.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 136aa    MW: 15319.2 Da    PI: 4.7066
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.61.8e-166881498
                T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                +r  lp +f++++ +   ++  + l  ++grsW+v+l++  ++ ++  l +GW eF+++n+L++gD+++Fkl +r e ++ v +fr
  POO02672.1  6 ARQKLPLNFVTTYVKT--QG-YVALSVPNGRSWNVELSIaLGSYSEAKLNNGWPEFASDNNLEVGDVCIFKLLDRPEVSFEVFIFR 88
                56689*****999533..44.79999***********88666666799***********************998877777777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
MKDLSARQKL PLNFVTTYVK TQGYVALSVP NGRSWNVELS IALGSYSEAK LNNGWPEFAS  60
DNNLEVGDVC IFKLLDRPEV SFEVFIFRVG EYDCQLWSQG DNATSASKVK GDVRVKTELT  120
ELNRNQNQNQ NLEVNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.14e-10B3 family protein