PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02674.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 218aa    MW: 24938.5 Da    PI: 10.1923
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02674.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.94.3e-1922122198
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS...-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesg...rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 ffkv +++++   + l +p +fa++h ++  + k+ +l  ++g   r+W+ ++++  r ++ +  +++GW  Fv++n+L++gD++vF l ++++++++v
  POO02674.1  22 FFKVAMQPSYIYGSHLDFPHDFARRHLKN--KLKDAILIVPHGgrrRTWSAYYNFivRENKVKARFQSGWMAFVRDNDLEVGDVCVFILLESTKTTFRV 118
                 889999988888888***********756..455788888888889*******88888888889************************99889999999 PP

                 EEE- CS
          B3  95 kvfr 98 
                  +fr
  POO02674.1 119 AIFR 122
                 9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MHRSEKVATL QKVIDFKSNH PFFKVAMQPS YIYGSHLDFP HDFARRHLKN KLKDAILIVP  60
HGGRRRTWSA YYNFIVRENK VKARFQSGWM AFVRDNDLEV GDVCVFILLE STKTTFRVAI  120
FRFNGNSKSP ISQAHEGGAI RVEAEEILTN ETLRGGSIND EIGNPSSLES FPAQQASGCM  180
TTPWKTSQRR LTSTEKARIL DSIPFESERP FFKVLMQP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.11e-11B3 family protein