PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02679.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 1070aa    MW: 120886 Da    PI: 6.5563
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02679.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.91.2e-1527109896
                 -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 + +l+++ l++p kf++++g++   s  + ++   g +W+++l  + ++++++++kGW +F+k   Lk g +++F+++g+sef  +  +
  POO02679.1  27 EETLQENKLRIPQKFVRKYGES--LSNSVFVKLACGSKWKMEL--KEQDNKIWFEKGWPDFAKHYALKRGSMLIFRYEGNSEF--HAFI 109
                 45566677***********966..8889***************..**********************************9999..5555 PP
2B351.81.5e-16265360194
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 ffkv +++++   + l +p +fa++h ++k ++  l++ +   ++W+v++++  + ++    +++GW +F ++n+L++gD++vF l ++++++++v
  POO02679.1 265 FFKVVMQPSYIYGSHLDFPHDFANRHLNNKSKDAILIVPNGGRKTWSVNYTFIERENTiiARFQSGWISFSRDNNLEVGDVCVFVLLESTKTTFRV 360
                 889999999999999***********77765655555555555*******9955555555999**********************98776665555 PP
3B350.73.1e-16453551197
                 EEEE-...-HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-...TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   1 ffkvl.tpsdvlks.grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvlt...kGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 ffk+l  ps+v+++ ++l lp +f++++   k+++  ++l  ++grsW  +l+++  + +y+ +   kGW eFv++n+L++gD+++Fkl +r+e ++ v
  POO02679.1 453 FFKTLmQPSYVGSKtDQLPLPLNFVTTYI--KTQG-YVVLSVPNGRSWYAELRMTPPGFSYIVArlcKGWPEFVNDNNLEVGDVCIFKLLDRDEISFEV 548
                 5566515667766689*********9994..3344.799999**********776666666655677*********************98887777788 PP

                 EEE CS
          B3  95 kvf 97 
                 +++
  POO02679.1 549 SIV 551
                 776 PP
4B3521.3e-16629712589
                 -..-HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
          B3   5 ltpsdvlks.grlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                 + + +v+ + ++l lp +f++++ +   e+  + l  ++grsW+v+l++   ++s++ ++t GW eF+++n+Lk+gD+++Fkl +r  
  POO02679.1 629 MHQTYVGFNcRQLKLPLNFVSKYVKT--EG-YVLLSVPNGRSWNVELKItlGRNSEAKLFT-GWPEFASDNNLKVGDVCIFKLLDRPA 712
                 4456677773568********99644..33.588889**********88777777777777.********************876543 PP
5B351.12.4e-16794881289
                 EEE-...-HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
          B3   2 fkvlt.psdvlks.grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrse 89 
                 +kvl+ + +v+ + ++l+lp +f++++ +   e+  ++l  ++grsW+v+l++++++++   l +GW eF+++n+Lk+ D+++Fkl +r  
  POO02679.1 794 CKVLMhQTYVGFNcRQLRLPLNFVTTYVKT--EG-YVVLSVPNGRSWNVELKITRGRNSeARLFTGWPEFASDNNLKVSDVCIFKLLDRPA 881
                 56665145666663679*******999644..33.69999***********99555555577777********************876543 PP
6B357.91.8e-189591058198
                  EEEE-..-HHHHT..T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3    1 ffkvltpsdvlks..grlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92  
                  f+kvl++s +  +  ++l lp +f+ ++   k+++ +++l  ++grsW+v+l++   +++ +  +l kGW eF+++n+Lk+ D+++Fkl +r e++l
  POO02679.1  959 FCKVLMQSTYVGRncKLLQLPLNFVMTYI--KTQG-DVVLSVPDGRSWKVELRItppSGSNCVATLDKGWPEFANDNNLKVSDVCIFKLLDRPETSL 1052
                  8899988865555345569******8884..3344.8***************995555555559999*********************999999999 PP

                  EEEEE- CS
          B3   93 vvkvfr 98  
                   v+++r
  POO02679.1 1053 EVSIVR 1058
                  999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1070 aa     Download sequence    
MSCGPQGDHN QAIFSPGTPH FFTVILEETL QENKLRIPQK FVRKYGESLS NSVFVKLACG  60
SKWKMELKEQ DNKIWFEKGW PDFAKHYALK RGSMLIFRYE GNSEFHAFIF DASTVEIEYP  120
SISIDVDKSN VDLELQSPKE KVVEDDYVEI LDDLSPCPKR KEKSPLSCPQ PHKIMRTSPT  180
GKTQSNSAGP NECELESSTS KGNLQSTNPE MIGKPDLLAN SDKDKSTTTT HEIDEIIRHM  240
ETHMYRSEKV ATFQKAIDFK SNRPFFKVVM QPSYIYGSHL DFPHDFANRH LNNKSKDAIL  300
IVPNGGRKTW SVNYTFIERE NTIIARFQSG WISFSRDNNL EVGDVCVFVL LESTKTTFRV  360
VTFHLNGNSK SPISQAHEGG AIQEEAEEDS TNETLPVGAI NNEIGNPSSL ESVPAKQESG  420
CMSTPSKTSQ HQSTSTERAR ILDSIPFKSE RPFFKTLMQP SYVGSKTDQL PLPLNFVTTY  480
IKTQGYVVLS VPNGRSWYAE LRMTPPGFSY IVARLCKGWP EFVNDNNLEV GDVCIFKLLD  540
RDEISFEVSI VRFAEYDCLQ RSQDECATRP SGGTINDEIG EPSSLDSFPA KQSSGCMFNP  600
WKTMTYAEKS RVLNSIPFES ERPFCKVVMH QTYVGFNCRQ LKLPLNFVSK YVKTEGYVLL  660
SVPNGRSWNV ELKITLGRNS EAKLFTGWPE FASDNNLKVG DVCIFKLLDR PAVSFEVFIT  720
RFPEYDCQLW SQGECATRPS GGSLNDEIGE PSSLDSFPAK QTSGCMFTPW KTMTYAEKSR  780
VLDSIPFESE RPFCKVLMHQ TYVGFNCRQL RLPLNFVTTY VKTEGYVVLS VPNGRSWNVE  840
LKITRGRNSE ARLFTGWPEF ASDNNLKVSD VCIFKLLDRP AVSFEVFIAR FPEYDCQLWS  900
QGECATRPSG GAINDEIGEP SSLDNFPAKQ ASRRMSTPSK RSVKAGILDS IHFISERPFC  960
KVLMQSTYVG RNCKLLQLPL NFVMTYIKTQ GDVVLSVPDG RSWKVELRIT PPSGSNCVAT  1020
LDKGWPEFAN DNNLKVSDVC IFKLLDRPET SLEVSIVRFA QYDCNQLIIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-43B3 family protein