PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02687.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 151aa    MW: 17143.6 Da    PI: 10.2157
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02687.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B365.58e-2121117398
                 EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SSSEE..EEEEE- CS
          B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesg.rsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkld.grsefelvvkvfr 98 
                  v +++++ + +rl +p +fa++h +k  ++ +++l+ ++g ++W vk+ + + k+ + ++++GWk F+++n+Lk+gD++vF l  g+ + ++ v +fr
  POO02687.1  21 EVVMQPYYVRGKRLAFPSNFAKKHLKK--RNEDVILKLPNGkKTWLVKYFFgEHKKAAPLFRGGWKAFARDNDLKVGDVCVFVLLeGEVKVSFEVLIFR 117
                 466799999999************655..44589999999989******995555556*************************7625577777888887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
SEKRAALQRT GGFESDRPSF EVVMQPYYVR GKRLAFPSNF AKKHLKKRNE DVILKLPNGK  60
KTWLVKYFFG EHKKAAPLFR GGWKAFARDN DLKVGDVCVF VLLEGEVKVS FEVLIFRDRG  120
ISNAPMSPAH DETSTPSDRE NLHSDQANGC K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.11e-13B3 family protein