PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO02688.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Protein Properties

Length: 195aa MW: 22488.1 Da PI: 10.4175

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO02688.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.7	4.3e-18	85	182	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 f+k+l+++++ l+++ +fa+++ +k+ s ++l+ ++gr+W+vk+i+ + ++ + +GWkeF ++n+L++gD++ F l + + ++ v +f POO02688.1 85 FCKILMQPSYVHGTYLSFSSTFATRCIKKT--SCNVILKALDGRTWTVKYIFgvYDRLRTARFISGWKEFSQDNNLEVGDVCAFVLLEGIKITFQVVIF 181 899*999999999*******7664..457***********997744444466778*****************987665555677777 PP - CS B3 98 r 98 r POO02688.1 182 R 182 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MKGMGNFSHL FCSFELKQDV YVIYFVHLWF WSQDFTGKLD SLSESYGDKS RQKTSKILGR 60 MKPLRRQEKY AALRRASGFK SKRPFCKILM QPSYVHGTYL SFSSTFATRC IKKTSCNVIL 120 KALDGRTWTV KYIFGVYDRL RTARFISGWK EFSQDNNLEV GDVCAFVLLE GIKITFQVVI 180 FRVNGKSNKA VSSGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49480.1	2e-14	B3 family protein