PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02692.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 734aa    MW: 83477.3 Da    PI: 10.4982
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02692.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.21.9e-1521112199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 ffk+ + +  l+++ l++p+ f++++g  ++ s  ++++ + g +W++kl  ++ +g+++l kGW eF+k   +k g +++F+++g+sef  +  +f++
  POO02692.1  21 FFKIVLEET-LQENKLRIPNLFLRKCG--ETLSNSVSIKLPCGSEWKMKL--KNDGGKVWLDKGWPEFAKYYSIKRGHMLIFRYEGNSEF--HAVIFDT 112
                 566665544.55556***********9..458889***************..**********************************9999..7777765 PP
2B356.16.9e-18247344198
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                 ffkv +++ +    +l +p +fa+++ ++k+++  l++ +es r+W+vk+  + + g+    +++GW  F++ n+L++gD++vF l ++++ ++ v +f
  POO02692.1 247 FFKVVMKPCSAHGTCLNFPASFARKYLKDKPGTAILRVSNESRRTWSVKF--KEYHGTsiARFQGGWPAFARGNNLEVGDVCVFVLLKDMKLSFEVVIF 343
                 788888888888888***********88888999****************..5555555699*************************99*999999999 PP

                 - CS
          B3  98 r 98 
                 r
  POO02692.1 344 R 344
                 8 PP
3B356.35.9e-184245131198
                 HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 ++ + l++p +fa+++ + k++++ l++ + sgr+W+vk+++   ++  +  +++GW  F++ n+L++gD++vF l ++ +  + v +fr
  POO02692.1 424 GRYCYLSFPASFARKYLKHKPNDVILKVSNGSGRTWSVKYRFkvYNRTTTARFKGGWMAFARGNNLEVGDVCVFVLLKDIKLLFEVVIFR 513
                 34599***********77778999****************99555555558999*********************988755446666665 PP
4B349.48.4e-16610708198
                 EEEE-..-H.HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsd.vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgr...yvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 ffk+ ++++ v+++  l lp +fa+++ ++k +  +++l +++ r+W+ +++    +   +r     +  GW +Fv++n+Lk+gD+++F+l++  +  +
  POO02692.1 610 FFKIVIQPSfVHSRWYLELPLDFAKRYLKNK-G--DVVLSTPNDRTWSAQFRLrhlK---SRglrAEFCCGWMKFVEDNNLKVGDVCIFELINGCKICF 702
                 566665554156667799*********6553.3..7***********9999884333...3323467779*********************98666655 PP

                 EEEEE- CS
          B3  93 vvkvfr 98 
                 +v+v+r
  POO02692.1 703 KVRVVR 708
                 666655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 734 aa     Download sequence    
MSRGAFGDSN HPAFSSRNPH FFKIVLEETL QENKLRIPNL FLRKCGETLS NSVSIKLPCG  60
SEWKMKLKND GGKVWLDKGW PEFAKYYSIK RGHMLIFRYE GNSEFHAVIF DTSTVEIDYP  120
SIPVNSDEPN IDGELRVPKR EVIEDDSVQV LDDCPPSRKT REKPLLPCSQ PHKKMRTSPN  180
AKTQCNSSCP KQKSEMKGKR NLHCNNTRKR ITEILRRMKA SASKPLGGSE EVSALQKASD  240
FKSKRPFFKV VMKPCSAHGT CLNFPASFAR KYLKDKPGTA ILRVSNESRR TWSVKFKEYH  300
GTSIARFQGG WPAFARGNNL EVGDVCVFVL LKDMKLSFEV VIFRLSGSSP TPMSPGRHIL  360
HARPDRNQST NTRKRKSEIL RHLKPSTSKP SSGSEEVAAL QKASDFKSKR PCCKVVMKPC  420
YVRGRYCYLS FPASFARKYL KHKPNDVILK VSNGSGRTWS VKYRFKVYNR TTTARFKGGW  480
MAFARGNNLE VGDVCVFVLL KDIKLLFEVV IFRVSANSTN PLSPDRMDEA IQVEPEESSS  540
NETESSGTIN DEPGTPSSLD NLLAKQANRD MSTIGKRSSK LSATRRQRGF TSIEKARLLE  600
RARFESKKPF FKIVIQPSFV HSRWYLELPL DFAKRYLKNK GDVVLSTPND RTWSAQFRLR  660
HLKSRGLRAE FCCGWMKFVE DNNLKVGDVC IFELINGCKI CFKVRVVRAA DEACHQKTQG  720
DKPKEDMRAK IVIK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1372377TRKRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-43B3 family protein