PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO02700.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Dof

Protein Properties

Length: 255aa MW: 26082.9 Da PI: 8.4263

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO02700.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123	1e-38	30	90	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++l+cprCdstntkfCyynny+ sqPr+fCkaCrryWt+GG+lr++P+Ggg+rkn k+s POO02700.1 30 EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDIPIGGGSRKNAKRS 90 57889****************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MPSETGEQCR RPAAKTQNPG GPTAAAAPPE QEHLPCPRCD STNTKFCYYN NYNFSQPRHF 60 CKACRRYWTH GGTLRDIPIG GGSRKNAKRS RTTSGAVSAV VSDHHHGHHH HPLNATPVLV 120 PLNHQGGGGG SGLHFGEVKP SVGGLCGGSF TSLLNSTQGP AGFLALGGFG LGLGTGFEDL 180 GFGLGRGIWP FSGVVGEGGG AGHIGANGGV RGFGNTWQLE NGSDHHGGVG GLVGGGGDFC 240 SWAEPAISTP GNGLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50410.1	5e-48	Dof family protein