PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02919.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ZF-HD
Protein Properties Length: 160aa    MW: 17723.7 Da    PI: 7.3426
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02919.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer96.91.5e-30560359
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                 +++YkeC++NhA+s+GghavDGC+Ef+ps ge+gt +al C ACgCHR+FHRre+ +
   POO02919.1  5 NINYKECRRNHAISVGGHAVDGCREFTPS-GEQGTEEALLCGACGCHRSFHRRENIN 60
                 689*************************9.999********************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MSRVNINYKE CRRNHAISVG GHAVDGCREF TPSGEQGTEE ALLCGACGCH RSFHRRENIN  60
NNGTTVVHRS SAPPALPVPA PSFVPPLVPT IPFVVLHPVD SYALSQPQYS GASRYYDQAP  120
HQAPYSDHHN EGEHGWALDH GDRDLEQKPN PIKKPKREPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.11e-22ZF-HD family protein