PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO03062.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

G2-like

Protein Properties

Length: 409aa MW: 45512.9 Da PI: 8.1367

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO03062.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.5	6.2e-33	263	318	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ POO03062.1 263 KQRRCWSPELHRRFVNALQQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 318 79****************************************************97 PP
2	Myb_DNA-binding	45.6	1.6e-14	265	316	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v+a +qlGg t+k I + m+ g+t ++ks++qky+ POO03062.1 265 RRCWSPELHRRFVNALQQLGGSqvaTPKQIRELMQvDGLTNDEVKSHLQKYR 316 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MGSIPSELSL DFRASFVPKT IHDFLKEVSS IGNVPERASK LDDFVRRLED EMKKIDAFKR 60 ELPLCMILLN DAILALKEES AQCGALNAQP VLEEFIPLKK DCEEHEEITK NNKNEKDSRD 120 KKNWMSSVQL WNTDDFPTSD ITTKDLKQNS KTQTKINEKR YALETQDPFQ SCRNRTTGRA 180 FVPFHKPYSS FPATVVRKDD KDEFPVHGLS LLTPGLKSPK EESGCGGVRS TSGSGRAVSS 240 SPANVQSNPR TGSQQPQQQA ARKQRRCWSP ELHRRFVNAL QQLGGSQVAT PKQIRELMQV 300 DGLTNDEVKS HLQKYRLHTR RLPSGTSAAP ANQPVVVLGG LWMSPDQYGD SSKASSSQSG 360 SPQGPLQLAA TRGGSPTTGE DYSMEDDEDA KSEGYSWKTH IHKPVKDDV

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MGSIPSELSL DFRASFVPKT IHDFLKEVSS IGNVPERASK LDDFVRRLED EMKKIDAFKR  60
ELPLCMILLN DAILALKEES AQCGALNAQP VLEEFIPLKK DCEEHEEITK NNKNEKDSRD  120
KKNWMSSVQL WNTDDFPTSD ITTKDLKQNS KTQTKINEKR YALETQDPFQ SCRNRTTGRA  180
FVPFHKPYSS FPATVVRKDD KDEFPVHGLS LLTPGLKSPK EESGCGGVRS TSGSGRAVSS  240
SPANVQSNPR TGSQQPQQQA ARKQRRCWSP ELHRRFVNAL QQLGGSQVAT PKQIRELMQV  300
DGLTNDEVKS HLQKYRLHTR RLPSGTSAAP ANQPVVVLGG LWMSPDQYGD SSKASSSQSG  360
SPQGPLQLAA TRGGSPTTGE DYSMEDDEDA KSEGYSWKTH IHKPVKDDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	8e-56	G2-like family protein