PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO03101.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 224aa MW: 26384 Da PI: 5.0689

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO03101.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	93.2	4.2e-29	54	180	4	128
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka..eekewyfFskrdkkyatgkrknratk..sgyWkatgkdkevlskkge 98 +rF+Ptdee v e kk+++++l+ + i++v+ y++ P +L +k+k+ +ekew +F++r++k++ g+ ++r++k sg+W+ t +++ v s +ge POO03101.1 54 FYRFDPTDEEFV-ELVLKKLNNQPLTR-NKIRDVEFYNYTPDELAEKYKQhrTEKEWLYFTPRAQKHEDGNCASRTVKdnSGFWRRTKSEQVVRSDSGE 150 58********.88889999999988.77**********85444422667**************99765569**********9* PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +g k+ +vf+ g+ +k+ kt+W+m+ey++ POO03101.1 151 IIGFKDKFVFHMGEPSKSGKTNWFMQEYSV 180 ****************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MEDCHDQLKK LGDAENPSSS SSSNNNDQIP NWSLWSSSSS SSGAMYNFDR LPLFYRFDPT 60 DEEFVELVLK KLNNQPLTRN KIRDVEFYNY TPDELAEKYK QHRTEKEWLY FTPRAQKHED 120 GNCASRTVKD NSGFWRRTKS EQVVRSDSGE IIGFKDKFVF HMGEPSKSGK TNWFMQEYSV 180 LDQTTNIKFD DWVLCKVYKR KVPRSTFTVD ENEDQPSDYE DEKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	1e-28	NAC family protein