PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO03102.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family NAC
Protein Properties Length: 150aa    MW: 17919 Da    PI: 10.9445
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO03102.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM54.15.3e-1768653128
         NAM  53 aeekewyfFskrdkkyatgkrk..nratk..sgyWk.atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                 +++ke +fF+++++k+++g+++  +r+++   g Wk +  + k+v ++ g+++g k+ Lv+++gr ++++ktdW+m+ey+l
  POO03102.1   6 SGQKERFFFTRKEHKSSKGEKSisKRTVSdkLGLWKsKNHHPKPVENSVGKVIGQKRKLVYHRGRYNDSQKTDWIMEEYSL 86 
                 578999**********9877541155333348****4455689999999******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MYMLDSGQKE RFFFTRKEHK SSKGEKSISK RTVSDKLGLW KSKNHHPKPV ENSVGKVIGQ  60
KRKLVYHRGR YNDSQKTDWI MEEYSLVNES TPRKEDKGTK LDKWKWVICR VYRESTSKKS  120
KKEELQILRM ITKLGRKKNL QRIMIMIKKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.12e-12NAC family protein