PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO03196.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 110aa    MW: 12569.5 Da    PI: 9.0026
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO03196.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.26.8e-14161031498
                 T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliy.....rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 + l++p +f +++     +s  +tle ++g +  v ++      + +s++  + +GW +F ++n+L+egD++vF+l++r++  l+v ++r
  POO03196.1  16 NYLYVPADFSKKYLRT--SSELITLEAPNGDQCIVSCTCnaskpSSSSSAKRIIRGWCGFFRENDLEEGDVCVFELINRRNIVLKVWIYR 103
                 6699******999533..6679********9999999776664433344466679**********************9888878888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
MKNPSFMVIL KPHNINYLYV PADFSKKYLR TSSELITLEA PNGDQCIVSC TCNASKPSSS  60
SSAKRIIRGW CGFFRENDLE EGDVCVFELI NRRNIVLKVW IYRVANYAGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-14B3 family protein