PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO03286.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 302aa    MW: 34209.1 Da    PI: 5.382
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO03286.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.86.9e-07207250755
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ++ r RR++i ++ +eL +l+P       +K+s ae+ + A +Y+k Lq
  POO03286.1 207 IAARERRRKITEKTQELGKLIPGG-----TKMSTAEMFQAASKYVKFLQ 250
                 56799*****************87.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MALSFCSTNW PSYSNSLHQN LNVPDTVVFP QIKKPRSSSA LSFPNTYSFN NVDPLVLQTN  60
ITHRNNSSFS NPTNDNTNFI SALSPQSLFP LEYSDQDYHN YNNYNLDYNS GFYGNINHYY  120
SDNYPEFFFN NGAYSPNYTG LIPENENYDI DQLLLAPLIA KPHDENVMSY GYNYKQEMVT  180
TNDNTSSDEL KKTTASSTTV AVSPQSIAAR ERRRKITEKT QELGKLIPGG TKMSTAEMFQ  240
AASKYVKFLQ AQVAVLKEMK EEPLLIKELR VLASPIIQEK LYSEEKCLVP KQLVDRTGGS  300
ND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.15e-24bHLH family protein