PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO03462.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 521aa    MW: 56735.4 Da    PI: 8.2197
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO03462.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY108.43.5e-34228284259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 dDgynWrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers  d++v+ei+Y+g+Hnh+
  POO03462.1 228 DDGYNWRKYGQKQVKGSEFPRSYYKCTHPSCPVKKKVERSL-DGQVTEIIYKGQHNHQ 284
                 8****************************************.***************8 PP
2WRKY107.56.8e-34407465159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC+v+k+ver+++dpk+v++tYeg+Hnh+
  POO03462.1 407 LDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHD 465
                 59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 521 aa     Download sequence    
MAENEQQPPS STSSPPSKSP AVPRPTITLP PRTSFESLLN GGGGGPGVGF SPGPMTLVSS  60
FFSESEECKS FSQLLAGAMA SPANRPNFPI GDEPADADFR FKQNRPSGLT IAQSPVFSVP  120
PGLSLAGLLD SPGLFSPGQG PFGMSHQQVL AQVTAQAAQS HSEYLTSLSA PPATSLTQPP  180
PFSTNKTTQQ EMPSSVPESS IAVKESSDIS HQDSKSQSSS FTVDKPNDDG YNWRKYGQKQ  240
VKGSEFPRSY YKCTHPSCPV KKKVERSLDG QVTEIIYKGQ HNHQPPQNNK RGKDVGNSNG  300
NSSAQGNLDL ASQMQSGHFS KSKDGTSPYA MFRKNQESSR ATHEHLSGTS DSEEVVDTDV  360
GVEEKDEDEP EAKRRNTEVR YSQPASSHKT VTEPRIIVQT TSEVDLLDDG YRWRKYGQKV  420
VKGNPYPRSY YKCTTPGCNV RKHVERASTD PKAVITTYEG KHNHDVPASK TSSHNTANNN  480
ASNQRLQNSG TEKHGLNNNM DLRNNSQQPI GRLRLKEEQI T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.11e-134WRKY family protein