PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO03696.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Protein Properties

Length: 843aa MW: 92704.4 Da PI: 7.3297

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO03696.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.1	1.6e-18	296	395	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++ + e++lv++ POO03696.1 296 FEKMLSASDAGRIGRLVLPKKCAEAYfpPISQPEGLPLKVQDAKGKEWIFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDIVTFSRLE-PEGKLVMG 392 89************************555566778***********99899999999.*******************766.77777777 PP EE- CS B3 96 vfr 98 +++ POO03696.1 393 FRK 395 776 PP

Sequence ? help Back to Top
Protein Sequence Length: 843 aa Download sequence
SAFEEGRFCE IFHKNASGWR CCESCGKRIH CGCIVSIHAF TLLDPGGIEC IPCARKSVFL 60 TSNPTWANSL FFPTPTAERL KELSVKNWNQ LAGSGPVPWR QAPSLFSSSI TSSELHPRVP 120 YEVDISSALT KLSCAERIPV SSLEQRKIED LSERLHNGCL KLGAREILEN GTAGKNCEEH 180 ISSCLSMSQQ SSSLKEDPST PQFGLTVPYT TTNETNDQFG VSRSNLRPTP PSLSKQFIGN 240 LQNGVDSSGD TQIRNARPRA DARGRNQLLP RYWPRFTDQE LQQISGDSNS VITPLFEKML 300 SASDAGRIGR LVLPKKCAEA YFPPISQPEG LPLKVQDAKG KEWIFQFRFW PNNNSRMYVL 360 EGVTPCIQSM QLQAGDIVTF SRLEPEGKLV MGFRKASVAP PSDQENETNK NCNGVSARGD 420 AELADPSSWS KVDKSGYIAK EVLGAKALIS RKRKSSTLGS KSKRLRIENE DMMELKLTWE 480 EAQGLLRPPS NHVPSVVVIE GFEFEEYEDA PVLGKPTIFA TNNGEKVQWA QCENCFKLRK 540 LPADALVPSK WTCSDNSWDP QRSSCSVSQE LPSEELEDLL PPSVSVASKK MKAAKQDMEN 600 VEALEGLDTL ANLAILGEGD SLPASAQATT KHPRHRPGCS CIVCIQPPSG KGPKHKPSCT 660 CNVCLTVKRR FRTLMMRREK KQSEKEAETT RKKQQQQQPL PEKLHDDTVV NNDAGNSPKR 720 NVDVHEISDD DPSKMKSSTS PFKGQIDLNI QPEREEELSP GSDSGGMMKL LQDATERYLR 780 QQRLSSSGCS ENPSGNVLRR DGGQAAGEKP SNAVNLGSNN HDADEDSPAT LTVKASVSTT 840 AAG

Sequence ? help Back to Top

Protein Sequence Length: 843 aa Download sequence

SAFEEGRFCE IFHKNASGWR CCESCGKRIH CGCIVSIHAF TLLDPGGIEC IPCARKSVFL  60
TSNPTWANSL FFPTPTAERL KELSVKNWNQ LAGSGPVPWR QAPSLFSSSI TSSELHPRVP  120
YEVDISSALT KLSCAERIPV SSLEQRKIED LSERLHNGCL KLGAREILEN GTAGKNCEEH  180
ISSCLSMSQQ SSSLKEDPST PQFGLTVPYT TTNETNDQFG VSRSNLRPTP PSLSKQFIGN  240
LQNGVDSSGD TQIRNARPRA DARGRNQLLP RYWPRFTDQE LQQISGDSNS VITPLFEKML  300
SASDAGRIGR LVLPKKCAEA YFPPISQPEG LPLKVQDAKG KEWIFQFRFW PNNNSRMYVL  360
EGVTPCIQSM QLQAGDIVTF SRLEPEGKLV MGFRKASVAP PSDQENETNK NCNGVSARGD  420
AELADPSSWS KVDKSGYIAK EVLGAKALIS RKRKSSTLGS KSKRLRIENE DMMELKLTWE  480
EAQGLLRPPS NHVPSVVVIE GFEFEEYEDA PVLGKPTIFA TNNGEKVQWA QCENCFKLRK  540
LPADALVPSK WTCSDNSWDP QRSSCSVSQE LPSEELEDLL PPSVSVASKK MKAAKQDMEN  600
VEALEGLDTL ANLAILGEGD SLPASAQATT KHPRHRPGCS CIVCIQPPSG KGPKHKPSCT  660
CNVCLTVKRR FRTLMMRREK KQSEKEAETT RKKQQQQQPL PEKLHDDTVV NNDAGNSPKR  720
NVDVHEISDD DPSKMKSSTS PFKGQIDLNI QPEREEELSP GSDSGGMMKL LQDATERYLR  780
QQRLSSSGCS ENPSGNVLRR DGGQAAGEKP SNAVNLGSNN HDADEDSPAT LTVKASVSTT  840
AAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	450	455	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-151	B3 family protein