PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO03739.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 435aa MW: 47046.3 Da PI: 5.5019

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO03739.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.1	4.3e-10	274	322	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq POO03739.1 274 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 322 58************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MSGQENEDVG FQHRSEGFLT CPSSGMSTNT LPEKVSGMMM SSLSMFKPSN GQDPFFGSGW 60 DPLVSLSQSE NFGGSSMVSH GEFCNPPYPV VLENQGMSSS SQLVQYPSDS SFVEMVPKFP 120 CFGNGGFTEM VGSFGLPQCA EIASTGCPSN YTLNKEKGSE RTSTIGGQSQ DGCQNSDGGI 180 RSSPNGKRRK QAPDSTSPLS PDKNAEGEQQ KDLSGENSDV RKEHDEKKPK MEETTSGNMR 240 SKQTGKQAKE NSNSGDTAKE NYIHVRARRG QATNSHSLAE RVRREKISER MRLLQELVPG 300 CNKITGKAVM LDEIINYVQS LQQQVEFLSM KLATVNPELN IDIERILSKD ASQILNSRGG 360 NGAIFGLGPG ISSSQHYPPG IFQGTMPSLP STAPHFASLP QTVLENELQG LFQMGFDSTT 420 AIDNVGPNGR LKSEL

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MSGQENEDVG FQHRSEGFLT CPSSGMSTNT LPEKVSGMMM SSLSMFKPSN GQDPFFGSGW  60
DPLVSLSQSE NFGGSSMVSH GEFCNPPYPV VLENQGMSSS SQLVQYPSDS SFVEMVPKFP  120
CFGNGGFTEM VGSFGLPQCA EIASTGCPSN YTLNKEKGSE RTSTIGGQSQ DGCQNSDGGI  180
RSSPNGKRRK QAPDSTSPLS PDKNAEGEQQ KDLSGENSDV RKEHDEKKPK MEETTSGNMR  240
SKQTGKQAKE NSNSGDTAKE NYIHVRARRG QATNSHSLAE RVRREKISER MRLLQELVPG  300
CNKITGKAVM LDEIINYVQS LQQQVEFLSM KLATVNPELN IDIERILSKD ASQILNSRGG  360
NGAIFGLGPG ISSSQHYPPG IFQGTMPSLP STAPHFASLP QTVLENELQG LFQMGFDSTT  420
AIDNVGPNGR LKSEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	2e-84	bHLH family protein