PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO03846.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 358aa    MW: 38221.3 Da    PI: 10.296
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO03846.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.21.2e-31275333259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D+y+WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+ +dp+++++tYegeH+h 
  POO03846.1 275 QDEYSWRKYGQKPIKGSPYPRGYYKCSTMrGCPARKHVERAPDDPSMLIVTYEGEHRHA 333
                 7*************************9877****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MAVELMGFPK MDDQKAIQEA AAQGLKSMEH LIRFLSHNQQ QTTAHPNLMN CTDLTDVTVS  60
KFRKVITLLN RTGHARFRRA PVHSSSNSSS SSSSGSLSLP QPQALAVAPA LPPATYVSPA  120
PVAPLPTVQA ASFVQSQPAP PQSMTLDFTK PNNFLSSNQK VAAAAAEVEF TKESFSVSSS  180
SSFMSSAITG DGSVSNGKQG SIFLNPAPTA SGGKPPLSAA PIKKRCHEHE HSGDVSGKIS  240
GSGSGKCHCS KRRKNRVKKT IRVPAISSKV ADIPQDEYSW RKYGQKPIKG SPYPRGYYKC  300
STMRGCPARK HVERAPDDPS MLIVTYEGEH RHAQPGLPDT TAAVGGVSLV FESTRPNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.11e-122WRKY family protein