PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO04076.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bZIP

Protein Properties

Length: 352aa MW: 40032 Da PI: 6.7484

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO04076.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	40.8	5e-13	64	105	3	48
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 ++k++rr+++NReAAr+sR+RKka++++Le+ +L + + e POO04076.1 64 DDKVQRRLAQNREAARKSRLRKKAYVQQLETSRLKLAQLEQ----E 105 68****************************85544444333....3 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MGIYEPFRQV PMWKNTFDHD NNLLYSGTTT IVEADPRQET KLEFLSHEST GPSGNDQEAN 60 KPTDDKVQRR LAQNREAARK SRLRKKAYVQ QLETSRLKLA QLEQELERSR KQGVYLGSSS 120 LCSSHLGHSG NLNSGITTFE MEYGYWVEEL NRQNGELRNA LQARVTSDVE LGILVENGLN 180 HYHNLFRMKE DAARSDIFYL MSGVWRTSAE RFFLWIGGFR PSELLNVVMP HIEPLNDQQV 240 AGVNNLRQSS QQAEDALTQG IDKLHQTLAL SMAADPMSEG GYDCQMAAAL EKLEPLESFV 300 NQADHLRQQT MRQMARILTT HQAARALLAL GDYFHRLRAL STLWAARPRE PA

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MGIYEPFRQV PMWKNTFDHD NNLLYSGTTT IVEADPRQET KLEFLSHEST GPSGNDQEAN  60
KPTDDKVQRR LAQNREAARK SRLRKKAYVQ QLETSRLKLA QLEQELERSR KQGVYLGSSS  120
LCSSHLGHSG NLNSGITTFE MEYGYWVEEL NRQNGELRNA LQARVTSDVE LGILVENGLN  180
HYHNLFRMKE DAARSDIFYL MSGVWRTSAE RFFLWIGGFR PSELLNVVMP HIEPLNDQQV  240
AGVNNLRQSS QQAEDALTQG IDKLHQTLAL SMAADPMSEG GYDCQMAAAL EKLEPLESFV  300
NQADHLRQQT MRQMARILTT HQAARALLAL GDYFHRLRAL STLWAARPRE PA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77920.1	1e-147	bZIP family protein