PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_co4005735.1_g010.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 103aa    MW: 11434.5 Da    PI: 7.518
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_co4005735.1_g010.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP42.22.1e-131294977
                               EEETTT--SS--S-STTTT-------S-- CS
                        SBP 49 fhelsefDeekrsCrrrLakhnerrrkkq 77
                               fh ls+fDe+krsCrr+L++hn+rrr+k 
  Pav_co4005735.1_g010.1.br  1 FHVLSDFDEGKRSCRRKLERHNNRRRRKP 29
                               9***********************99975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 103 aa     Download sequence    
FHVLSDFDEG KRSCRRKLER HNNRRRRKPT NSKGGIRKES QREIQIEDTN CDGGAGEDSI  60
RLSSQLNDKE ELPESEGGRI STLSSLPDSQ IVHSDGGASL VAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11527RRKLERHNNRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18830.23e-07SBP family protein