PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_co4010635.1_g010.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HD-ZIP

Protein Properties

Length: 79aa MW: 9164.4 Da PI: 11.0126

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_co4010635.1_g010.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63.1	4.1e-20	15	66	2	53
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 rk+ ++tkeq + Lee F+++++++ +++e LA++l+L rqV vWFqNrRa Pav_co4010635.1_g010.1.mk 15 RKKLRLTKEQSRLLEESFRQHHTLNPKQKEALAMQLKLRPRQVEVWFQNRRA 66 78899**********************************************9 PP
2	HD-ZIP_I/II	81.8	1e-26	15	66	1	52
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRA 52 +kk+rl+keq++lLEesF+++++L+p++K++la +L+l+prqv+vWFqnrRA Pav_co4010635.1_g010.1.mk 15 RKKLRLTKEQSRLLEESFRQHHTLNPKQKEALAMQLKLRPRQVEVWFQNRRA 66 69*************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 79 aa Download sequence
MEDEEDSSNG SGPPRKKLRL TKEQSRLLEE SFRQHHTLNP KQKEALAMQL KLRPRQVEVW 60 FQNRRASGSS LVALVHART

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01430.1	2e-31	HD-ZIP family protein