PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_co4011195.1_g010.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 128aa    MW: 14406.9 Da    PI: 6.2545
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_co4011195.1_g010.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY26.21.6e-08110128119
                                ---SS-EEEEEEE--TT-S CS
                       WRKY   1 ldDgynWrKYGqKevkgse 19 
                                +dDg++WrKYG+K+vk+s+
  Pav_co4011195.1_g010.1.br 110 MDDGFKWRKYGKKSVKNSP 128
                                69**************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    
FLAIMDCLQN PNPSSAGPYH FGESIDPSMD FDEFSDYFML DYGVDDHQDS SSLSIMSPEK  60
SMADRSTGSS GGATSRNSNN NMKCRNEGRR NKIEMGHRVA FRTKSELEVM DDGFKWRKYG  120
KKSVKNSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.11e-18WRKY family protein