PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_co4015577.1_g010.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 60aa    MW: 7046.23 Da    PI: 10.6625
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_co4015577.1_g010.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H221.75.3e-072143123
                               EEETTTTEEESSHHHHHHHHHHT CS
                    zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                               ++C++C+k F r  nL+ H r H
  Pav_co4015577.1_g010.1.mk 21 FVCEICNKGFQRDQNLQLHRRGH 43
                               89*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 60 aa     Download sequence    
MDPDAEVVAL SPTTLMATNR FVCEICNKGF QRDQNLQLHR RGHNLPWKLK QRLNKEVKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66730.19e-36C2H2 family protein