PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_co4063385.1_g010.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 184aa    MW: 21326.4 Da    PI: 8.7616
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_co4063385.1_g010.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.41.7e-151081751990
                                -HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
                         B3  19 pkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                                p +f++eh ++   + + +l+ ++ r+W v+l  +k+++++ l+  W +Fv++n+Lk+gD++vF+l+++ +  
  Pav_co4063385.1_g010.1.mk 108 PAEFVKEHLNQA--HDKAILRVSDERTWHVNL--CKYGRAFRLQ-RWMRFVRENDLKVGDVCVFELINNiKPL 175
                                789999995553..347999************..**********.9*******************99875444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MHRSYIGRHP MWLTSDFSIL MGHLSKNSAN VILWDLDVDG EETDEDDDSV DSLDDFPPCP  60
KTRKISPIAP QPHKKNRTCS TSKTKNIEHV CGSSKTRKFV IRRPEASPAE FVKEHLNQAH  120
DKAILRVSDE RTWHVNLCKY GRAFRLQRWM RFVRENDLKV GDVCVFELIN NIKPLFNVAL  180
FHAK