PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_co4063581.1_g010.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 260aa    MW: 28586.1 Da    PI: 8.0389
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_co4063581.1_g010.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.48.8e-141868155
                        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               s+y+GV+ +k  grW+A+   +     +k+++lg f+++ eAa+a+++a+ k +g
  Pav_co4063581.1_g010.1.mk 18 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEIEAARAYDKAAIKCNG 68
                               89********.7******5553..2.26**********99**********99776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
EFVHILRRQS TGFSRGSSKY RGVTLHKCGR WEARMGQFLG KKYIYLGLFD SEIEAARAYD  60
KAAIKCNGRE AVTNFEPNSY DGEIMSEAHN GGSDKSLDLN LGIAPPLVSE LQKNNSNLSS  120
FPVQLGCDDI PIHMRTRNEN SAPAPMRAQL SHGSMVASEE PPIMSNINSS FFPIQMERAT  180
EKRMDVNSFP NWAWQLQGLH GGATPMPLFS AAASSGFPSS TATSPPAAVT QLHFPNTTIH  240
HHHFSPSTVT NNIPGFYCRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.33e-58AP2 family protein