PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000002.1_g350.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 404aa    MW: 43343.8 Da    PI: 7.2182
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000002.1_g350.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2636.2e-20193242255
                        AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                +y+GVr+++ +g+W+AeIrd +     + +r++lg+f tae Aa+a+++a+++++g
  Pav_sc0000002.1_g350.1.mk 193 RYRGVRQRP-WGKWAAEIRDpF-----KaTRVWLGTFETAEAAAQAYDEAALRFRG 242
                                7********.**********66.....56*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    
MRVLKVAEKD QRAARHTNIE TEHSIEEWLY EPLVFSQQLQ QRQRQRGGGS GGGGGESGIL  60
ASAGSSMLLR LDREREMSAM VSALAHVVAG DEELAAAESS LVINRQSEDV GGGLISSSVG  120
GSDSGTKRGR EEEEGGGGQS VTRLCRAFGE FPQQSSSPVL GEGSSTTPPT QTAFPPSTFV  180
YSATQIAEPI RRRYRGVRQR PWGKWAAEIR DPFKATRVWL GTFETAEAAA QAYDEAALRF  240
RGNKAKLNFP ENVRLRTPIA DSPVTQLTNS APPNTLLSVA TSTEPIVHSQ AFQSMQHSSH  300
EASRNLLSYC KPVDVQRQQP MSLYDQMLLS SSAPPSVSSS SSSPLASSVS SSSSSPSPPA  360
FSSLFWAQSS LSLRPATGDQ TSTAADSQSQ QWSSSGHYSA PFSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.19e-27ERF family protein