PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000009.1_g440.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 206aa    MW: 24478.8 Da    PI: 7.1744
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000009.1_g440.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.000241437223
                               EETTTTEEESSHHHHHHHHHH..T CS
                    zf-C2H2  2 kCpdCgksFsrksnLkrHirt..H 23
                               kC  C + F+  ++L+ H+rt  H
  Pav_sc0000009.1_g440.1.mk 14 KCAACYRQFNKIEHLVEHMRTsyH 37
                               6999****************9777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MDYRVESSET LRNKCAACYR QFNKIEHLVE HMRTSYHSAH EPTCGILHTY TCVYAYRYET  60
TGIRPEYLRD AMPLRQVQKK IQDFLCNGEP MWKIRPRGGK ARILVGHGLD HDLDSLQVEY  120
PQVMIRYDIQ TGIQDPYEDC VATMKLYMRM RSQVHKIEAY PLASDPQNRN NFASWRQNEL  180
ERMSPEQMLE ASRSDYYCWC LDSRDM